CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NFIA_091670
(
Neosartorya fischeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADNFIAG00006889
T33822_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADNFIAP00006722
RRM
89
156
HVGNLSFEATSADINDLFAGCGVTNVRIVEDKLTRTPKGFGYVEFETVDGLKKALDLSGTTLQGRAIR
Links
Other
RRM
family RBPs
Other
Neosartorya fischeri
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFUA_2G16400
Aspergillus fumigatus
CADAFUAG00004230
N
0.956
ACLA_075320
Aspergillus clavatus
CADACLAG00006833
N
0.941
ATEG_02298
Aspergillus terreus
CADATEAG00000182
N
0.926
An15g06790
Aspergillus niger
CADANGAG00012358
N
0.897
fgenesh1_pg.00815_#_18
Aspergillus carbonarius
fgenesh1_pg.00815_#_18
N
0.868
ANIA_07350
Aspergillus nidulans
CADANIAG00000083
N
0.868
AO090102000222
Aspergillus oryzae
CADAORAG00009578
N
0.853
AFLA_003440
Aspergillus flavus
CADAFLAG00010410
N
0.853
Pc21g01490
Penicillium chrysogenum
Pc21g01490
N
0.783
estExt_fgenesh1_pg.C_180055
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_180055
N
0.779
PMAA_034530
Penicillium marneffei
PMAA_034530
N
0.779
HCAG_06478
Histoplasma capsulatum
HCAG_06478
N
0.779
UREG_04821
Uncinocarpus reesii
UREG_04821
N
0.765
PTRG_05566
Pyrenophora tritici repentis
PTRG_05566
N
0.765
MGYG_07815
Microsporum gypseum
MGYG_07815
N
0.765
AB04189.1
Alternaria brassicicola
AB04189.1
N
0.765
BDBG_02754
Blastomyces dermatitidis
BDBG_02754
N
0.765
MCYG_03836
Microsporum canis
MCYG_03836
N
0.765
TEQG_03246
Trichophyton equinum
TEQG_03246
N
0.750
EAT82319.2
Phaeosphaeria nodorum
EAT82319.2
N
0.750
ARB_03225
Arthroderma benhamiae
ARB_03225
N
0.750
TERG_05285
Trichophyton rubrum
TERG_05285
N
0.750
SNOG_09984
Stagonospora nodorum
SNOG_09984
N
0.750
CPSG_04053
Coccidioides posadasii
CPSG_04053
N
0.750
TESG_04321
Trichophyton tonsurans
TESG_04321
N
0.750
PABG_02641
Paracoccidioides brasiliensis
PABG_02641
N
0.735
CIMG_09493
Coccidioides immitis
CIMG_09493
N
0.735
TRV_02454
Trichophyton verrucosum
TRV_02454
N
0.735