CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SPOG_01811
(
Schizosaccharomyces cryophilus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPOG_01811
T30745_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPOG_01811T0
RRM
233
303
IVIKNIPFSLKKEVLFKVFTALDIPRPYAFNYHFDNGVFRGLAFANFHTPEEAKTVVQVLNGYEITGRRLR
Links
Other
RRM
family RBPs
Other
Schizosaccharomyces cryophilus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACR235W
Ashbya gossypii
ACR235W
N
0.732
CLUG_00283
Candida lusitaniae
CLUG_00283
N
0.704
estExt_fgenesh1_pg.C_chr_8.10303
Pichia stipitis
estExt_fgenesh1_pg.C_chr_8.10303
N
0.704
KLLA0E19845g
Kluyveromyces lactis
KLLA0E19845g
N
0.732
SJAG_00563
Schizosaccharomyces japonicus
SJAG_00563
N
0.944
SOCG_00687
Schizosaccharomyces octosporus
SOCG_00687
N
0.986
cip2
Schizosaccharomyces pombe
SPAC12G12.03
N
0.986