CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CBN15812
(
Caenorhabditis brenneri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CBN15812
T34040_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN15812
RRM
237
306
LYIGNLGPAGPQQVTEKELNDVFYQYGDIRCLRVLTEKGCAFIEYTTREAAERAAERAFNKTFIKGRKLS
Links
Other
RRM
family RBPs
Other
Caenorhabditis brenneri
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBG17615
Caenorhabditis briggsae
CBG17615
N
0.900
CBN23793
Caenorhabditis brenneri
CBN23793
N
1.000
CRE11038
Caenorhabditis remanei
CRE11038
N
0.886
CRE23244
Caenorhabditis remanei
CRE23244
N
0.886
T11G6.8
Caenorhabditis elegans
T11G6.8
N
0.871