CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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T11G6.8
(
Caenorhabditis elegans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
T11G6.8
T46231_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
T11G6.8.1
RRM
237
306
LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSFNKTFIKGKRLT
T11G6.8.2
RRM
237
306
LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSFNKTFIKGKRLT
Links
Other
RRM
family RBPs
Other
Caenorhabditis elegans
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE11038
Caenorhabditis remanei
CRE11038
N
0.986
CRE23244
Caenorhabditis remanei
CRE23244
N
0.986
CBG17615
Caenorhabditis briggsae
CBG17615
N
0.957
CBN15812
Caenorhabditis brenneri
CBN15812
N
0.871
CBN23793
Caenorhabditis brenneri
CBN23793
N
0.871