CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SREK1
(
Danio rerio
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDARG00000009764
T36056_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000016374
RRM
7
78
IQITNLSAAVSSDQMRTLFGFLGDIDELRLYPPDNAPLSFSSKVCYIKYREPSSVGVAQHLTNTVFIDRALI
ENSDARP00000016374
RRM
170
238
VYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARALTYNGVMFGDRPLK
Links
Other
RRM
family RBPs
Other
Danio rerio
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
EEB88731.1
Moniliophthora perniciosa
EEB88731.1
N
0.000
EEB88782.1
Moniliophthora perniciosa
EEB88782.1
N
0.000
EEB88827.1
Moniliophthora perniciosa
EEB88827.1
N
0.000
EEB88856.1
Moniliophthora perniciosa
EEB88856.1
N
0.000
EEB88904.1
Moniliophthora perniciosa
EEB88904.1
N
0.000
EEB89022.1
Moniliophthora perniciosa
EEB89022.1
N
0.000
EEB89072.1
Moniliophthora perniciosa
EEB89072.1
N
0.000
EEB89663.1
Moniliophthora perniciosa
EEB89663.1
N
0.000
EEB89900.1
Moniliophthora perniciosa
EEB89900.1
N
0.000
PTTG_10798
Puccinia triticina
PTTG_10798
N
0.000