SREK1 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000009764 T36056_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000016374 RRM 7 78
ENSDARP00000016374 RRM 170 238

Links

Other RRM family RBPs
Other Danio rerio RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SREK1 Oryzias latipes ENSORLG00000002711 N 0.908
SREK1 Takifugu rubripes ENSTRUG00000002960 N 0.901
SREK1 Tetraodon nigroviridis ENSTNIG00000013463 N 0.901
sfrs12 Xenopus tropicalis ENSXETG00000021460 N 0.894
SREK1 Gallus gallus ENSGALG00000014775 N 0.887
SREK1 Pan troglodytes ENSPTRG00000016936 N 0.872
SREK1 Pteropus vampyrus ENSPVAG00000009763 N 0.872
LOC100393736 Callithrix jacchus ENSCJAG00000015950 N 0.872
Ame_R007411 Ailuropoda melanoleuca Ame_R007411 N 0.872
SREK1 Sorex araneus ENSSARG00000000795 N 0.872
ENSPPYG00000015515 Pongo pygmaeus ENSPPYG00000015515 N 0.872
SFRS12 Macaca mulatta ENSMMUG00000014586 N 0.872
SREK1 Gorilla gorilla ENSGGOG00000004737 N 0.872
Srek1 Mus musculus ENSMUSG00000032621 N 0.872
SREK1 Homo sapiens ENSG00000153914 N 0.872
SREK1 Echinops telfairi ENSETEG00000012977 N 0.872
SREK1 Loxodonta africana ENSLAFG00000013853 N 0.872
SREK1 Myotis lucifugus ENSMLUG00000014801 N 0.865
SREK1 Oryctolagus cuniculus ENSOCUG00000001319 N 0.865
SREK1 Erinaceus europaeus ENSEEUG00000003430 N 0.865
SREK1 Ochotona princeps ENSOPRG00000012111 N 0.858
SREK1 Sus scrofa ENSSSCG00000016955 N 0.816
SREK1 Choloepus hoffmanni ENSCHOG00000004956 N 0.752
estExt_fgenesh2_pg.C_2190052 Branchiostoma floridae estExt_fgenesh2_pg.C_2190052 N 0.702
estExt_fgenesh2_pg.C_2190047 Branchiostoma floridae estExt_fgenesh2_pg.C_2190047 N 0.702