rbm46 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000079452 T36260_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.816
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000099341 RRM 13 80
ENSDARP00000099341 RRM 93 160
ENSDARP00000099341 RRM 188 252

Links

Other RRM family RBPs
Other Danio rerio RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.816
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.811
RBM46 Bos taurus ENSBTAG00000001696 I 0.821
RBM46 Canis familiaris ENSCAFG00000008473 I 0.816
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.816
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.816
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.801
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.771
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.797
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.816
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.781
RBM46 Equus caballus ENSECAG00000007649 I 0.803
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.791
RBM46 Echinops telfairi ENSETEG00000014902 I 0.816
RBM46 Felis catus ENSFCAG00000009246 I 0.801
RBM46 Homo sapiens ENSG00000151962 D 0.816
RBM46 Gallus gallus ENSGALG00000009278 I 0.734
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.816
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.816
RBM47 Macropus eugenii ENSMEUG00000009516 I 0.708
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.816
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.811
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.816
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.816
ENSMODG00000007003 Monodelphis domestica ENSMODG00000007003 I 0.708
Rbm46 Mus musculus ENSMUSG00000033882 I 0.816
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.802
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.816
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.748
RBM46 Oryzias latipes ENSORLG00000002429 I 0.776
RBM47 Oryzias latipes ENSORLG00000005847 I 0.703
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.816
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.816
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.816
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.816
RBM46 Sorex araneus ENSSARG00000006520 I 0.816
RBM46 Sus scrofa ENSSSCG00000008994 I 0.816
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.806
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.776
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.741
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.771
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.816
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.816
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.732