RBM46 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000002429 T40094_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.717
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000003018 RRM 58 127
ENSORLP00000003018 RRM 138 205
ENSORLP00000003018 RRM 233 297

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.793
rbm46 Danio rerio ENSDARG00000079452 I 0.776
RBM46 Tetraodon nigroviridis ENSTNIG00000008714 I 0.764
RBM46 Equus caballus ENSECAG00000007649 I 0.737
Rbm46 Mus musculus ENSMUSG00000033882 I 0.727
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.727
RBM46 Bos taurus ENSBTAG00000001696 I 0.727
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.722
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.722
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.722
RBM46 Echinops telfairi ENSETEG00000014902 I 0.722
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.722
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.722
RBM46 Homo sapiens ENSG00000151962 D 0.722
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.722
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.722
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.722
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.722
RBM46 Canis familiaris ENSCAFG00000008473 I 0.722
RBM46 Sus scrofa ENSSSCG00000008994 I 0.722
RBM46 Sorex araneus ENSSARG00000006520 I 0.722
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.722
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.722
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.722
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.722
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.722
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.717
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.717
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.717
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.717
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.712
RBM46 Felis catus ENSFCAG00000009246 I 0.712
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.707
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.707
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.706