RBM46 (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000009278 T37677_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM46
M052_0.6 		Homo sapiens RAUSAWD RNAcompete
Ray et al.(2013)
RNCMPT00054 		0.872
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000015078 RRM 63 132
ENSGALP00000015078 RRM 143 209
ENSGALP00000015078 RRM 238 302
ENSGALP00000038096 RRM 1 61
ENSGALP00000038096 RRM 72 138
ENSGALP00000038096 RRM 167 231

Links

Other RRM family RBPs
Other Gallus gallus RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017773 Ailuropoda melanoleuca Ame_R017773 I 0.872
RBM46 Anolis carolinensis ENSACAG00000015599 I 0.867
RBM46 Bos taurus ENSBTAG00000001696 I 0.872
RBM46 Canis familiaris ENSCAFG00000008473 I 0.872
RBM46 Choloepus hoffmanni ENSCHOG00000003429 I 0.872
LOC100409217 Callithrix jacchus ENSCJAG00000001768 I 0.867
ENSCPOG00000010284 Cavia porcellus ENSCPOG00000010284 I 0.857
ENSCPOG00000019272 Cavia porcellus ENSCPOG00000019272 I 0.828
ENSCPOG00000020396 Cavia porcellus ENSCPOG00000020396 I 0.862
rbm46 Danio rerio ENSDARG00000079452 I 0.734
RBM46 Dasypus novemcinctus ENSDNOG00000016195 I 0.862
Rbm46 Dipodomys ordii ENSDORG00000006405 I 0.858
RBM46 Equus caballus ENSECAG00000007649 I 0.887
RBM46 Erinaceus europaeus ENSEEUG00000011824 I 0.828
RBM46 Echinops telfairi ENSETEG00000014902 I 0.872
RBM46 Felis catus ENSFCAG00000009246 I 0.857
RBM46 Homo sapiens ENSG00000151962 D 0.872
RBM46 Gorilla gorilla ENSGGOG00000001876 I 0.872
RBM46 Loxodonta africana ENSLAFG00000015448 I 0.877
RBM46 Macropus eugenii ENSMEUG00000013328 I 0.867
RBM46 Meleagris gallopavo ENSMGAG00000001457 I 0.886
RBM46 Myotis lucifugus ENSMLUG00000003221 I 0.867
RBM46 Macaca mulatta ENSMMUG00000021147 I 0.872
RBM46 Monodelphis domestica ENSMODG00000001302 I 0.872
Rbm46 Mus musculus ENSMUSG00000033882 I 0.862
RBM46 Ornithorhynchus anatinus ENSOANG00000002141 I 0.842
RBM46 Oryctolagus cuniculus ENSOCUG00000017859 I 0.872
RBM46 Ochotona princeps ENSOPRG00000007136 I 0.783
ENSPPYG00000015144 Pongo pygmaeus ENSPPYG00000015144 I 0.872
RBM46 Pan troglodytes ENSPTRG00000016538 I 0.872
RBM46 Pteropus vampyrus ENSPVAG00000008376 I 0.872
Rbm46 Rattus norvegicus ENSRNOG00000025823 I 0.872
RBM46 Sorex araneus ENSSARG00000006520 I 0.872
RBM46 Sus scrofa ENSSSCG00000008994 I 0.872
RBM46 Tupaia belangeri ENSTBEG00000013949 I 0.857
RBM46 Taeniopygia guttata ENSTGUG00000005307 I 0.872
RBM46 Takifugu rubripes ENSTRUG00000004237 I 0.716
RBM46 Tarsius syrichta ENSTSYG00000010435 I 0.867
RBM46 Tursiops truncatus ENSTTRG00000001239 I 0.852
RBM46_XENTR Xenopus tropicalis ENSXETG00000022412 I 0.767