SRSF2 (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000007469 T38010_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.775
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.775
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.775
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.775
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000006280 RRM 17 87

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH45229 Xenopus laevis AAH45229 I 0.775
amel4_ncbi_hmm3241 Apis mellifera amel4_ncbi_hmm3241 I 0.704
amel4_ncbi_hmm3241 Tribolium castaneum amel4_ncbi_hmm3241 I 0.704
Ame_R006395 Ailuropoda melanoleuca Ame_R006395 I 0.761
DGIL_AUG5s1074g3t1 Acyrtosiphon pisum DGIL_AUG5s1074g3t1 I 0.704
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.775
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.775
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.775
SRSF2 Choloepus hoffmanni ENSCHOG00000014019 I 0.746
ENSCING00000004198 Ciona intestinalis ENSCING00000004198 I 0.704
LOC100407351 Callithrix jacchus ENSCJAG00000004211 I 0.704
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.775
ENSCSAVG00000009199 Ciona savignyi ENSCSAVG00000009199 I 0.704
SRSF2 Danio rerio ENSDARG00000010906 I 0.761
srsf2 Danio rerio ENSDARG00000057484 I 0.761
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.775
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.775
SRSF2 Homo sapiens ENSG00000161547 D 0.775
ENSG00000180771 Homo sapiens ENSG00000180771 I 0.704
SRSF2 Gasterosteus aculeatus ENSGACG00000003105 I 0.761
SRSF2 Gasterosteus aculeatus ENSGACG00000014884 I 0.761
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.775
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.775
SRSF2 Meleagris gallopavo ENSMGAG00000004083 I 0.746
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.775
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.775
ENSMMUG00000007639 Macaca mulatta ENSMMUG00000007639 I 0.704
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.775
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.775
Srsf2 Mus musculus ENSMUSG00000034120 I 0.775
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.775
SRSF2 Oryctolagus cuniculus ENSOCUG00000021840 I 0.732
SRSF2 Oryzias latipes ENSORLG00000001230 I 0.732
Q9DGK5_ORYLA Oryzias latipes ENSORLG00000018688 I 0.746
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.775
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.775
ENSPTRG00000034554 Pan troglodytes ENSPTRG00000034554 I 0.704
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.775
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.775
SRSF2 Sus scrofa ENSSSCG00000012212 I 0.761
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.775
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.775
SRSF2 Tetraodon nigroviridis ENSTNIG00000001280 I 0.761
SRSF2 Takifugu rubripes ENSTRUG00000002362 I 0.746
SRSF2 Takifugu rubripes ENSTRUG00000018104 I 0.761
srsf2 Xenopus tropicalis ENSXETG00000025271 I 0.775
fgenesh2_pg.scaffold_240000061 Branchiostoma floridae fgenesh2_pg.scaffold_240000061 I 0.732