RBM42 (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000009880 T38541_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM42
M142_0.6 		Homo sapiens AACUAMG RNAcompete
Ray et al.(2013)
RNCMPT00151 		1.000
ENSXETG00000017599
M237_0.6 		Xenopus tropicalis WACUAC RNAcompete
Ray et al.(2013)
RNCMPT00282 		0.958
CG2931
M138_0.6 		Drosophila melanogaster DACUAAG RNAcompete
Ray et al.(2013)
RNCMPT00147 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000009000 RRM 380 450

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH73459 Xenopus laevis AAH73459 I 0.000
AAI27425 Xenopus laevis AAI27425 I 0.000
Ame_R003830 Ailuropoda melanoleuca Ame_R003830 I 0.000
ZC3H10 Anolis carolinensis ENSACAG00000005020 I 0.000
A5D7H8_BOVIN Bos taurus ENSBTAG00000009542 I 0.000
ZC3H10 Canis familiaris ENSCAFG00000000104 I 0.000
LOC100410117 Callithrix jacchus ENSCJAG00000011803 I 0.000
ZC3H10 Cavia porcellus ENSCPOG00000002916 I 0.000
ZC3H10 Dasypus novemcinctus ENSDNOG00000000333 I 0.000
Zc3h10 Dipodomys ordii ENSDORG00000001081 I 0.000
LOC100059294 Equus caballus ENSECAG00000013003 I 0.000
ZC3H10 Loxodonta africana ENSLAFG00000014817 I 0.000
ZC3H10 Macropus eugenii ENSMEUG00000001222 I 0.000
ZC3H10 Macaca mulatta ENSMMUG00000021084 I 0.000
Zc3h10 Mus musculus ENSMUSG00000039810 I 0.000
ZC3H10 Oryctolagus cuniculus ENSOCUG00000017349 I 0.000
ZC3H10 Procavia capensis ENSPCAG00000005636 I 0.000
ENSPPYG00000004644 Pongo pygmaeus ENSPPYG00000004644 I 0.000
ZC3H10 Pan troglodytes ENSPTRG00000005078 I 0.000
ZC3H10 Pteropus vampyrus ENSPVAG00000007566 I 0.000
Zc3h10 Rattus norvegicus ENSRNOG00000040281 I 0.000
ZC3H10 Sorex araneus ENSSARG00000007208 I 0.000
ZC3H10 Sus scrofa ENSSSCG00000000378 I 0.000
ZC3H10 Spermophilus tridecemlineatus ENSSTOG00000007753 I 0.000
ZC3H10 Tursiops truncatus ENSTTRG00000016415 I 0.000
ZC3H10 Vicugna pacos ENSVPAG00000009524 I 0.000
zc3h10 Xenopus tropicalis ENSXETG00000009476 I 0.000