SRSF2 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000021840 T39747_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.803
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.803
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.803
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000017218 RRM 16 86

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010340 Aedes aegypti AAEL010340 I 0.718
AAH45229 Xenopus laevis AAH45229 I 0.803
AGAP009742 Anopheles gambiae AGAP009742 I 0.732
amel4_ncbi_hmm3241 Apis mellifera amel4_ncbi_hmm3241 I 0.732
amel4_ncbi_hmm3241 Tribolium castaneum amel4_ncbi_hmm3241 I 0.732
Ame_R006395 Ailuropoda melanoleuca Ame_R006395 I 0.761
CPIJ007047 Culex quinquefasciatus CPIJ007047 I 0.718
CpipJ_CPIJ007047 Culex pipiens CpipJ_CPIJ007047 I 0.718
DGIL_AUG5s1074g3t1 Acyrtosiphon pisum DGIL_AUG5s1074g3t1 I 0.746
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.803
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.803
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.803
SRSF2 Choloepus hoffmanni ENSCHOG00000014019 I 0.789
ENSCING00000004198 Ciona intestinalis ENSCING00000004198 I 0.718
LOC100407351 Callithrix jacchus ENSCJAG00000004211 I 0.704
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.803
ENSCSAVG00000009199 Ciona savignyi ENSCSAVG00000009199 I 0.732
SRSF2 Danio rerio ENSDARG00000010906 I 0.803
srsf2 Danio rerio ENSDARG00000057484 I 0.803
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.803
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.803
SRSF2 Erinaceus europaeus ENSEEUG00000009656 N 0.732
SRSF2 Homo sapiens ENSG00000161547 D 0.803
SRSF2 Gasterosteus aculeatus ENSGACG00000003105 I 0.803
SRSF2 Gasterosteus aculeatus ENSGACG00000014884 I 0.803
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.803
SRSF2 Loxodonta africana ENSLAFG00000007469 I 0.732
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.803
SRSF2 Meleagris gallopavo ENSMGAG00000004083 I 0.746
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.803
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.803
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.803
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.803
Srsf2 Mus musculus ENSMUSG00000034120 I 0.803
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.803
SRSF2 Oryzias latipes ENSORLG00000001230 I 0.775
Q9DGK5_ORYLA Oryzias latipes ENSORLG00000018688 I 0.789
ENSPPYG00000003786 Pongo pygmaeus ENSPPYG00000003786 I 0.704
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.803
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.803
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.803
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.803
SRSF2 Sus scrofa ENSSSCG00000012212 I 0.817
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.803
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.803
SRSF2 Tetraodon nigroviridis ENSTNIG00000001280 I 0.803
SRSF2 Takifugu rubripes ENSTRUG00000002362 I 0.789
SRSF2 Takifugu rubripes ENSTRUG00000018104 I 0.803
srsf2 Xenopus tropicalis ENSXETG00000025271 I 0.803
estExt_Genewise1.C_sca_50520 Lottia gigantea estExt_Genewise1.C_sca_50520 I 0.732
e_gw.736.13.1 Nematostella vectensis e_gw.736.13.1 I 0.704
e_gw.91.104.1 Nematostella vectensis e_gw.91.104.1 I 0.704
e_gw1.120.82.1 Daphnia pulex e_gw1.120.82.1 I 0.718
SC35 Drosophila melanogaster FBgn0040286 I 0.718
GA18884-RA Drosophila pseudoobscura FBgn0078884 I 0.718
GF15672 Drosophila ananassae FBgn0092696 I 0.718
GG10262 Drosophila erecta FBgn0102571 I 0.718
GH11678 Drosophila grimshawi FBgn0119158 I 0.718
GI17122 Drosophila mojavensis FBgn0139866 I 0.718
GM26218 Drosophila sechellia FBgn0181073 I 0.718
GD22120 Drosophila simulans FBgn0193531 I 0.718
GJ16161 Drosophila virilis FBgn0203346 I 0.718
GK14626 Drosophila willistoni FBgn0216632 I 0.718
fgenesh2_pg.scaffold_240000061 Branchiostoma floridae fgenesh2_pg.scaffold_240000061 I 0.761
gw1.5.1039.1 Lottia gigantea gw1.5.1039.1 I 0.704
ISCW001255 Ixodes scapularis ISCW001255 I 0.732