CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSPPYG00000025850
(
Pongo pygmaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPPYG00000025850
T40620_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000023480
RRM
16
74
LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEDAAMNAR
Links
Other
RRM
family RBPs
Other
Pongo pygmaeus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100397230
Callithrix jacchus
ENSCJAG00000004122
N
0.814
LOC100397230
Callithrix jacchus
ENSCJAG00000008143
N
0.829
LOC100397230
Callithrix jacchus
ENSCJAG00000008744
N
0.712
HNRNPA3
Homo sapiens
ENSG00000170144
I
0.783
ENSG00000215492
Homo sapiens
ENSG00000215492
I
0.843
HNRNPA3
Ornithorhynchus anatinus
ENSOANG00000008622
N
0.743