ENSPTRG00000034554 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000034554 T40822_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF2
M352_0.6 		Homo sapiens AGSAGAGUA SELEX
Cook et al.(2011)
953_7543047 		0.845
SRSF2
M332_0.6 		Homo sapiens UGUUCSAGWU SELEX
Cook et al.(2011)
791_10094314 		0.845
SRSF2
M274_0.6 		Homo sapiens GUUCGAGUA SELEX
Cook et al.(2011)
244_7543047 		0.845
SRSF2
M070_0.6 		Homo sapiens GGAGWD RNAcompete
Ray et al.(2013)
RNCMPT00072 		0.845
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000056044 RRM 16 86

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010340 Aedes aegypti AAEL010340 I 0.746
AAH45229 Xenopus laevis AAH45229 I 0.831
AGAP009742 Anopheles gambiae AGAP009742 I 0.732
amel4_ncbi_hmm3241 Apis mellifera amel4_ncbi_hmm3241 I 0.704
amel4_ncbi_hmm3241 Tribolium castaneum amel4_ncbi_hmm3241 I 0.704
Ame_R006395 Ailuropoda melanoleuca Ame_R006395 I 0.803
CPIJ007047 Culex quinquefasciatus CPIJ007047 I 0.746
CpipJ_CPIJ007047 Culex pipiens CpipJ_CPIJ007047 I 0.746
DGIL_AUG5s1074g3t1 Acyrtosiphon pisum DGIL_AUG5s1074g3t1 I 0.704
SRSF2 Anolis carolinensis ENSACAG00000008553 I 0.845
SFRS2_BOVIN Bos taurus ENSBTAG00000018258 I 0.845
SRSF2 Canis familiaris ENSCAFG00000005147 I 0.845
SRSF2 Choloepus hoffmanni ENSCHOG00000014019 I 0.817
LOC100407351 Callithrix jacchus ENSCJAG00000004211 I 0.944
LOC100409845 Callithrix jacchus ENSCJAG00000013412 I 0.845
SRSF2 Danio rerio ENSDARG00000010906 I 0.817
srsf2 Danio rerio ENSDARG00000057484 I 0.817
SRSF2 Dasypus novemcinctus ENSDNOG00000000439 I 0.845
Srsf2 Dipodomys ordii ENSDORG00000014460 I 0.845
SRSF2 Erinaceus europaeus ENSEEUG00000009656 N 0.775
SRSF2 Homo sapiens ENSG00000161547 D 0.845
ENSG00000180771 Homo sapiens ENSG00000180771 I 0.972
SRSF2 Gasterosteus aculeatus ENSGACG00000003105 I 0.803
SRSF2 Gasterosteus aculeatus ENSGACG00000014884 I 0.817
SRSF2 Gorilla gorilla ENSGGOG00000014378 I 0.845
ENSGGOG00000022679 Gorilla gorilla ENSGGOG00000022679 I 0.972
ENSGGOG00000025657 Gorilla gorilla ENSGGOG00000025657 I 0.972
SRSF2 Loxodonta africana ENSLAFG00000007469 I 0.704
SRSF2 Macropus eugenii ENSMEUG00000016745 I 0.845
SRSF2 Meleagris gallopavo ENSMGAG00000004083 I 0.789
SRSF2 Microcebus murinus ENSMICG00000016956 I 0.845
SRSF2 Myotis lucifugus ENSMLUG00000009759 I 0.845
ENSMMUG00000007639 Macaca mulatta ENSMMUG00000007639 I 0.972
LOC707883 Macaca mulatta ENSMMUG00000022413 I 0.845
SRSF2 Monodelphis domestica ENSMODG00000001575 I 0.845
Srsf2 Mus musculus ENSMUSG00000034120 I 0.845
SRSF2 Ornithorhynchus anatinus ENSOANG00000002695 I 0.845
SRSF2 Oryzias latipes ENSORLG00000001230 I 0.789
Q9DGK5_ORYLA Oryzias latipes ENSORLG00000018688 I 0.789
ENSPPYG00000003786 Pongo pygmaeus ENSPPYG00000003786 I 0.944
ENSPPYG00000008668 Pongo pygmaeus ENSPPYG00000008668 I 0.845
SFRS2_PANTR Pan troglodytes ENSPTRG00000009692 I 0.845
SRSF2 Pteropus vampyrus ENSPVAG00000014264 I 0.845
Sfrs2 Rattus norvegicus ENSRNOG00000000248 I 0.845
SRSF2 Sus scrofa ENSSSCG00000012212 I 0.718
SRSF2 Tupaia belangeri ENSTBEG00000014339 I 0.845
SRSF2 Taeniopygia guttata ENSTGUG00000007799 I 0.845
SRSF2 Tetraodon nigroviridis ENSTNIG00000001280 I 0.803
SRSF2 Takifugu rubripes ENSTRUG00000002362 I 0.789
SRSF2 Takifugu rubripes ENSTRUG00000018104 I 0.803
srsf2 Xenopus tropicalis ENSXETG00000025271 I 0.831
estExt_fgenesh1_pm.C_490002 Capitella teleta estExt_fgenesh1_pm.C_490002 I 0.704
SC35 Drosophila melanogaster FBgn0040286 I 0.704
GA18884-RA Drosophila pseudoobscura FBgn0078884 I 0.704
GF15672 Drosophila ananassae FBgn0092696 I 0.704
GG10262 Drosophila erecta FBgn0102571 I 0.704
GH11678 Drosophila grimshawi FBgn0119158 I 0.704
GI17122 Drosophila mojavensis FBgn0139866 I 0.704
GM26218 Drosophila sechellia FBgn0181073 I 0.704
GD22120 Drosophila simulans FBgn0193531 I 0.704
GJ16161 Drosophila virilis FBgn0203346 I 0.704
GK14626 Drosophila willistoni FBgn0216632 I 0.704
fgenesh2_pg.scaffold_240000061 Branchiostoma floridae fgenesh2_pg.scaffold_240000061 I 0.704
gw1.5.1039.1 Lottia gigantea gw1.5.1039.1 I 0.704
ISCW001255 Ixodes scapularis ISCW001255 I 0.718