XM_002876082.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_5001705 T44444_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_5001705 RRM 78 148
fgenesh1_pg.C_scaffold_5001705 RRM 180 247

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30152.m002412 Ricinus communis 30152.m002412 N 0.754
AT3G52150 Arabidopsis thaliana AT3G52150-TAIR-G N 0.944
cassava36538.valid.m1 Manihot esculenta cassava36538.valid.m1 N 0.768
Glyma08g16100.1 Glycine max Glyma08g16100.1 N 0.746
Glyma15g42610.1 Glycine max Glyma15g42610.1 N 0.739
MDP0000270177 Malus x domestica MDP0000270177 N 0.757
mgf011216m Mimulus guttatus mgf011216m N 0.739
PK21582.1 Cannabis sativa PK21582.1 N 0.746
B9HNK5_POPTR Populus trichocarpa POPTR_0009s07030 N 0.732
ppa010401m Prunus persica ppa010401m N 0.732