cassava36538.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava36538.valid.m1 T49345_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava36538.valid.m1 RRM 83 153
cassava36538.valid.m1 RRM 183 253

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma08g16100.1 Glycine max Glyma08g16100.1 N 0.908
30152.m002412 Ricinus communis 30152.m002412 N 0.908
B9HNK5_POPTR Populus trichocarpa POPTR_0009s07030 N 0.901
Glyma15g42610.1 Glycine max Glyma15g42610.1 N 0.894
GSVIVG00032039001 Vitis vinifera GSVIVG00032039001 N 0.867
PK21582.1 Cannabis sativa PK21582.1 N 0.866
mgf011216m Mimulus guttatus mgf011216m N 0.859
ppa010401m Prunus persica ppa010401m N 0.845
AT3G52150 Arabidopsis thaliana AT3G52150-TAIR-G N 0.810
MDP0000270177 Malus x domestica MDP0000270177 N 0.810
XM_002876082.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001705 N 0.768
BRADI4G27050 Brachypodium distachyon BRADI4G27050 N 0.746
LOC_Os09g10760 Oryza sativa LOC_Os09g10760 N 0.739
SB02G018650 Sorghum bicolor Sb02g018650 N 0.732
GRMZM2G143870 Zea mays GRMZM2G143870 N 0.725