LOC_Os08g38410 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os08g38410 T45117_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g38410.1 RRM 25 93
LOC_Os08g38410.1 RRM 113 182
LOC_Os08g38410.2 RRM 1 39
LOC_Os08g38410.2 RRM 59 128
LOC_Os08g38410.3 RRM 25 93
LOC_Os08g38410.3 RRM 113 183

Links

Other RRM family RBPs
Other Oryza sativa RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH74333 Xenopus laevis AAH74333 N 0.000
AAI33216 Xenopus laevis AAI33216 N 0.000
PCBP3 Canis familiaris ENSCAFG00000011907 N 0.000
PCBP4 Danio rerio ENSDARG00000024276 N 0.000
pcbp3 Danio rerio ENSDARG00000054378 I 0.000
zgc:110045 Danio rerio ENSDARG00000057141 N 0.000
Pcbp3 Dipodomys ordii ENSDORG00000003640 N 0.000
PCBP2 Erinaceus europaeus ENSEEUG00000001077 N 0.000
LOC426023 Gallus gallus ENSGALG00000013313 N 0.000
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.000
PCBP3 Ornithorhynchus anatinus ENSOANG00000006265 N 0.000
ENSPPYG00000011525 Pongo pygmaeus ENSPPYG00000011525 N 0.000
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.000
PCBP3 Spermophilus tridecemlineatus ENSSTOG00000007178 N 0.000
ENSTNIG00000003546 Tetraodon nigroviridis ENSTNIG00000003546 N 0.000
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.000
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.000
PCBP3 Tarsius syrichta ENSTSYG00000005254 N 0.000
PCBP2 Vicugna pacos ENSVPAG00000000406 N 0.000
pcbp1 Xenopus tropicalis ENSXETG00000011483 N 0.000