BRADI3G39090 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G39090 T33252_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G39090.1 RRM 24 92
BRADI3G39090.1 RRM 114 184
BRADI3G39090.2 RRM 38 108

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.850
BGIOSIBCE028327 Oryza indica BGIOSIBCE028327 N 0.836
LOC_Os08g38410 Oryza sativa LOC_Os08g38410 N 0.836
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.729
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.729
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.729
PDK_20s1748891g001 Phoenix dactylifera PDK_20s1748891g001 N 0.722
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.721
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.721
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.721
29629.m001425 Ricinus communis 29629.m001425 N 0.721
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.714
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.714
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.714
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.714
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.714
ppa006963m Prunus persica ppa006963m N 0.707
29917.m002004 Ricinus communis 29917.m002004 N 0.707
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.707
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.707
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.707
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.707
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.702
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.702
MDP0000202850 Malus x domestica MDP0000202850 N 0.700
PK22392.1 Cannabis sativa PK22392.1 N 0.700