cassava1155.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava1155.valid.m1 T49088_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava1155.valid.m1 RRM 113 154
cassava1155.valid.m1 RRM 177 248
cassava1155.valid.m1 RRM 295 359

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G23700 Arabidopsis thaliana AT3G23700-TAIR-G N 0.000
Cucsa.094980 Cucumis sativus Cucsa.094980 N 0.000
XM_002885542.1 Arabidopsis lyrata fgenesh2_kg.3__2587__AT3G23700.1 N 0.000
Glyma11g36830.1 Glycine max Glyma11g36830.1 N 0.000
Glyma18g00740.1 Glycine max Glyma18g00740.1 N 0.000
GSVIVG00031632001 Vitis vinifera GSVIVG00031632001 N 0.000
MDP0000127313 Malus x domestica MDP0000127313 N 0.000
Medtr3g104300 Medicago truncatula Medtr3g104300 N 0.000
mgf012420m Mimulus guttatus mgf012420m N 0.000
PK04155.1 Cannabis sativa PK04155.1 N 0.000
B9IAB2_POPTR Populus trichocarpa POPTR_0014s14580 N 0.000
ppa009736m Prunus persica ppa009736m N 0.000