Cucsa.094980 (Cucumis sativus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Cucsa.094980 T60996_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.094980.1 S1 91 169
Cucsa.094980.1 S1 179 257
Cucsa.094980.2 S1 91 169
Cucsa.094980.2 S1 179 257

Links

Other S1 family RBPs
Other Cucumis sativus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00031632001 Vitis vinifera GSVIVG00031632001 N 0.811
cassava24038.valid.m1 Manihot esculenta cassava24038.valid.m1 N 0.778
mgf012420m Mimulus guttatus mgf012420m N 0.767
PK04155.1 Cannabis sativa PK04155.1 N 0.761
ppa009736m Prunus persica ppa009736m N 0.741
B9IAB2_POPTR Populus trichocarpa POPTR_0014s14580 N 0.736
Glyma18g00740.1 Glycine max Glyma18g00740.1 N 0.734
Glyma11g36830.1 Glycine max Glyma11g36830.1 N 0.728
XM_002885542.1 Arabidopsis lyrata fgenesh2_kg.3__2587__AT3G23700.1 N 0.728
AT3G23700 Arabidopsis thaliana AT3G23700-TAIR-G N 0.722