CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.11.491.1
(
Lottia gigantea
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
e_gw1.11.491.1
T49704_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.11.491.1
RRM
292
358
LFVGNLPHNIAEGELKKFFEQYGVVMELRINTKSSGGKVPNFGFVVFENPDPVQHILSIKPIRFNGE
Links
Other
RRM
family RBPs
Other
Lottia gigantea
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.701
g3bp2
Danio rerio
ENSDARG00000014790
I
0.701
G3BP2
Danio rerio
ENSDARG00000074572
I
0.701
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.716
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.701