CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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G3BP2
(
Danio rerio
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSDARG00000074572
T36226_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP2
M021_0.6
Homo sapiens
AGGAUDR
RNAcompete
Ray et al.(2013)
RNCMPT00021
0.910
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000092787
RRM
337
403
LFVGNLPHDIDEGELKDFFMTFGNVVEMRINTKGVGGKLPNFGFVVFDDSDPVQRILGAKPIMFRGE
Links
Other
RRM
family RBPs
Other
Danio rerio
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
1.000
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.940
Q2KJ17_BOVIN
Bos taurus
ENSBTAG00000014041
I
0.910
G3BP2
Oryctolagus cuniculus
ENSOCUG00000003262
I
0.910
G3BP2
Otolemur garnettii
ENSOGAG00000000157
I
0.910
G3BP2
Vicugna pacos
ENSVPAG00000010710
I
0.910
G3bp2
Mus musculus
ENSMUSG00000029405
I
0.910
G3BP2
Macaca mulatta
ENSMMUG00000002153
I
0.910
G3BP2
Canis familiaris
ENSCAFG00000008371
I
0.910
G3BP2
Monodelphis domestica
ENSMODG00000019205
I
0.910
G3BP2
Ochotona princeps
ENSOPRG00000006307
I
0.910
G3BP2
Procavia capensis
ENSPCAG00000015109
I
0.910
Ame_R007258
Ailuropoda melanoleuca
Ame_R007258
I
0.910
ENSTBEG00000012323
Tupaia belangeri
ENSTBEG00000012323
I
0.910
G3BP2
Taeniopygia guttata
ENSTGUG00000001561
I
0.910
G3BP2
Sorex araneus
ENSSARG00000009503
I
0.910
G3bp2
Rattus norvegicus
ENSRNOG00000002433
I
0.910
ENSPPYG00000014846
Pongo pygmaeus
ENSPPYG00000014846
I
0.910
G3BP2
Pan troglodytes
ENSPTRG00000016175
I
0.910
G3BP2
Pteropus vampyrus
ENSPVAG00000010166
I
0.910
G3BP2
Myotis lucifugus
ENSMLUG00000004753
I
0.910
ENSOANG00000004714
Ornithorhynchus anatinus
ENSOANG00000004714
I
0.910
G3BP2
Equus caballus
ENSECAG00000007917
I
0.910
G3BP2
Gallus gallus
ENSGALG00000010882
I
0.910
G3BP2
Gorilla gorilla
ENSGGOG00000014947
I
0.910
G3BP2
Homo sapiens
ENSG00000138757
D
0.910
G3BP2
Felis catus
ENSFCAG00000010124
I
0.910
LOC100413275
Callithrix jacchus
ENSCJAG00000019897
I
0.910
G3BP2
Cavia porcellus
ENSCPOG00000012052
I
0.910
G3BP2
Erinaceus europaeus
ENSEEUG00000013436
I
0.910
G3bp2
Dipodomys ordii
ENSDORG00000004825
I
0.910
G3BP2
Macropus eugenii
ENSMEUG00000004126
I
0.910
G3BP2
Meleagris gallopavo
ENSMGAG00000007221
I
0.910
G3BP2
Loxodonta africana
ENSLAFG00000023321
I
0.910
G3BP2
Microcebus murinus
ENSMICG00000007795
I
0.910
G3BP2
Tursiops truncatus
ENSTTRG00000013795
I
0.896
G3BP2
Takifugu rubripes
ENSTRUG00000011405
I
0.896
G3BP2
Tetraodon nigroviridis
ENSTNIG00000011044
I
0.896
G3BP2
Anolis carolinensis
ENSACAG00000008695
I
0.896
ENSTBEG00000008258
Tupaia belangeri
ENSTBEG00000008258
I
0.896
g3bp2
Danio rerio
ENSDARG00000014790
I
0.896
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.896
G3BP2
Dasypus novemcinctus
ENSDNOG00000012491
I
0.881
G3BP2
Choloepus hoffmanni
ENSCHOG00000005346
I
0.881
G3BP2
Echinops telfairi
ENSETEG00000016219
I
0.866
g3bp2
Xenopus tropicalis
ENSXETG00000000334
I
0.836
AAH76729
Xenopus laevis
AAH76729
I
0.791
ENSRNOG00000001595
Rattus norvegicus
ENSRNOG00000001595
I
0.761
g3bp1
Xenopus tropicalis
ENSXETG00000010712
I
0.746
G3BP1
Meleagris gallopavo
ENSMGAG00000005963
I
0.731
G3BP1
Ornithorhynchus anatinus
ENSOANG00000005110
I
0.731
G3BP1
Taeniopygia guttata
ENSTGUG00000000753
I
0.731
G3BP1
Ochotona princeps
ENSOPRG00000010562
I
0.731
G3BP1
Canis familiaris
ENSCAFG00000017841
I
0.701
Ame_R008928
Ailuropoda melanoleuca
Ame_R008928
I
0.701
G3BP1_BOVIN
Bos taurus
ENSBTAG00000020309
I
0.701
e_gw1.11.491.1
Lottia gigantea
e_gw1.11.491.1
N
0.701
G3BP1
Callithrix jacchus
ENSCJAG00000015407
I
0.701
ENSCHOG00000010802
Choloepus hoffmanni
ENSCHOG00000010802
I
0.701
ENSPPYG00000015968
Pongo pygmaeus
ENSPPYG00000015968
I
0.701
G3BP1
Loxodonta africana
ENSLAFG00000009182
I
0.701
G3BP1
Microcebus murinus
ENSMICG00000012235
I
0.701
G3BP1
Myotis lucifugus
ENSMLUG00000001581
I
0.701
G3BP1
Macaca mulatta
ENSMMUG00000014701
I
0.701
G3BP1
Homo sapiens
ENSG00000145907
D
0.701
G3BP1
Echinops telfairi
ENSETEG00000017447
I
0.701
G3BP1
Dasypus novemcinctus
ENSDNOG00000018758
I
0.701
LOC100060090
Equus caballus
ENSECAG00000003368
I
0.701
G3BP1
Erinaceus europaeus
ENSEEUG00000012278
I
0.701
G3bp1
Mus musculus
ENSMUSG00000018583
I
0.701
ENSOCUG00000022069
Oryctolagus cuniculus
ENSOCUG00000022069
I
0.701
ENSSSCG00000017080
Sus scrofa
ENSSSCG00000017080
I
0.701
G3BP1
Tupaia belangeri
ENSTBEG00000004386
I
0.701
G3BP1
Tarsius syrichta
ENSTSYG00000004570
I
0.701
G3BP1
Vicugna pacos
ENSVPAG00000004461
I
0.701
ENSSSCG00000017079
Sus scrofa
ENSSSCG00000017079
I
0.701
ENSOCUG00000022143
Oryctolagus cuniculus
ENSOCUG00000022143
I
0.701
G3BP1
Pan troglodytes
ENSPTRG00000017438
I
0.701
G3BP1
Pteropus vampyrus
ENSPVAG00000017250
I
0.701
e_gw.517.12.1
Branchiostoma floridae
e_gw.517.12.1
I
0.700
e_gw.9.159.1
Branchiostoma floridae
e_gw.9.159.1
I
0.700