CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R008025
(
Ailuropoda melanoleuca
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Ame_R008025
T55549_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R008025
RRM
81
125
LFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGECTF
Links
Other
RRM
family RBPs
Other
Ailuropoda melanoleuca
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCAFG00000024939
Canis familiaris
ENSCAFG00000024939
N
1.000
CELF4
Myotis lucifugus
ENSMLUG00000001755
N
0.889
ENSORLG00000013361
Oryzias latipes
ENSORLG00000013361
N
0.889