CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSORLG00000013361
(
Oryzias latipes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSORLG00000013361
T40210_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000016753
RRM
45
86
LFIGQIPRNLEEKDLKPLFEEFGKIYELTVLKDRFTGMHKGG
Links
Other
RRM
family RBPs
Other
Oryzias latipes
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF4
Myotis lucifugus
ENSMLUG00000001755
N
0.929
ENSCAFG00000024939
Canis familiaris
ENSCAFG00000024939
N
0.889
Ame_R008025
Ailuropoda melanoleuca
Ame_R008025
N
0.889