CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R008026
(
Ailuropoda melanoleuca
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Ame_R008026
T55550_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R008026
RRM
31
99
LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINSLHGSQTMPGAS
Links
Other
RRM
family RBPs
Other
Ailuropoda melanoleuca
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100386457
Callithrix jacchus
ENSCJAG00000021135
I
0.986
BRUNOL4
Homo sapiens
ENSG00000101489
D
0.986
CELF4
Macaca mulatta
ENSMMUG00000006866
I
0.986
Celf5
Mus musculus
ENSMUSG00000034818
N
0.826
CELF5
Ornithorhynchus anatinus
ENSOANG00000009501
N
0.797
CELF4
Pan troglodytes
ENSPTRG00000009982
N
0.986
fgenesh2_pg.scaffold_186000062
Branchiostoma floridae
fgenesh2_pg.scaffold_186000062
N
0.870