CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PTTG_03386
(
Puccinia triticina
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
PTTG_03386
T59987_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_03386T0
S1
241
311
YKIYDGTVASIKDFGCFVTLKGVAGKAEGLVHVNAIAAGRVNHPSDLVSRGQPVKVKVVSIAGERIGISMK
Links
Other
S1
family RBPs
Other
Puccinia triticina
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BDBG_08912
Blastomyces dermatitidis
BDBG_08912
N
0.708
ACLA_013700
Aspergillus clavatus
CADACLAG00000914
N
0.720
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.703
AFUA_5G10830
Aspergillus fumigatus
CADAFUAG00006235
N
0.707
An14g03770
Aspergillus niger
CADANGAG00011313
N
0.736
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.736
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.703
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.707
HCAG_00961
Histoplasma capsulatum
HCAG_00961
N
0.708
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.708
Pc21g10420
Penicillium chrysogenum
Pc21g10420
N
0.750
PGTG_09681
Puccinia graminis
PGTG_09681
N
0.986
PMAA_073440
Penicillium marneffei
PMAA_073440
N
0.708