XM_002885542.1 (Arabidopsis lyrata)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 fgenesh2_kg.3__2587__AT3G23700.1 T60676_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.3__2587__AT3G23700.1 S1 104 182
fgenesh2_kg.3__2587__AT3G23700.1 S1 192 270

Links

Other S1 family RBPs
Other Arabidopsis lyrata RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT3G23700 Arabidopsis thaliana AT3G23700-TAIR-G N 0.981
cassava24038.valid.m1 Manihot esculenta cassava24038.valid.m1 N 0.741
Cucsa.094980 Cucumis sativus Cucsa.094980 N 0.728
GSVIVG00031632001 Vitis vinifera GSVIVG00031632001 N 0.723
mgf012420m Mimulus guttatus mgf012420m N 0.723
B9IAB2_POPTR Populus trichocarpa POPTR_0014s14580 N 0.717