CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDC2
(
Canis familiaris
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSCAFG00000000224
T61973_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000000323
YTH
573
662
LVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERL
ENSCAFP00000000324
YTH
1270
1359
LVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERL
Links
Other
YTH
family RBPs
Other
Canis familiaris
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB03863.1
Alternaria brassicicola
AB03863.1
N
0.000
An08g00930
Aspergillus niger
CADANGAG00006412
N
0.000
EAT87800.2
Phaeosphaeria nodorum
EAT87800.2
N
0.000
FOXG_05436
Fusarium oxysporum
FOXG_05436
N
0.000
FVEG_02700
Fusarium verticillioides
FVEG_02700
N
0.000
GSTUMT00003933001
Tuber melanosporum
GSTUMT00003933001
N
0.000
NCU01017
Neurospora crassa
NCU01017
N
0.000
PTRG_04194
Pyrenophora tritici repentis
PTRG_04194
N
0.000