PITG_10487 (Phytophthora infestans)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		PITG_10487 T00307_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PITG_10487T0 RRM 13 83
PITG_10487T0 RRM 121 190
PITG_10487T0 CCCH ZF 212 236
PITG_10487T0 CCCH ZF 282 306
PITG_10487T0 CCCH ZF 339 363
PITG_10487T0 CCCH ZF 393 416
PITG_10487T0 CCCH ZF 438 462

Links

Other CCCH ZF,RRM family RBPs
Other Phytophthora infestans RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_112000041 Phytophthora ramorum fgenesh1_pg.C_scaffold_112000041 N 0.902
s_516083 Phytophthora sojae s_516083 N 0.932
estExt_Genewise1Plus.C_110210 Phytophthora capsici estExt_Genewise1Plus.C_110210 N 0.925