s_516083 (Phytophthora sojae)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		s_516083 T01002_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_516083 RRM 13 83
s_516083 RRM 118 187
s_516083 CCCH ZF 209 233
s_516083 CCCH ZF 277 301
s_516083 CCCH ZF 342 366
s_516083 CCCH ZF 396 419
s_516083 CCCH ZF 441 465

Links

Other CCCH ZF,RRM family RBPs
Other Phytophthora sojae RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PITG_10487 Phytophthora infestans PITG_10487 N 0.932
estExt_Genewise1Plus.C_110210 Phytophthora capsici estExt_Genewise1Plus.C_110210 N 0.921
fgenesh1_pg.C_scaffold_112000041 Phytophthora ramorum fgenesh1_pg.C_scaffold_112000041 N 0.902