cassava31399.valid.m1 (Manihot esculenta)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		cassava31399.valid.m1 T00844_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava31399.valid.m1 CCCH ZF 189 214
cassava31399.valid.m1 RRM 350 410

Links

Other CCCH ZF,RRM family RBPs
Other Manihot esculenta RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
La Drosophila melanogaster FBgn0011638 N 0.000
GA10645-RA Drosophila pseudoobscura FBgn0070701 N 0.000
GF15376 Drosophila ananassae FBgn0092401 N 0.000
GG21576 Drosophila erecta FBgn0113754 N 0.000
GH13748 Drosophila grimshawi FBgn0121224 N 0.000
GI17890 Drosophila mojavensis FBgn0140631 N 0.000
GL26419 Drosophila persimilis FBgn0164001 N 0.000
GJ17394 Drosophila virilis FBgn0204566 N 0.000