CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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orf19.2105
(
Candida albicans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
orf19.2105
T01470_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
orf19.2105
CCCH ZF
99
125
FQPDVCKDFQQIGYCGYGDTCKFLHVR
Links
Other
CCCH ZF
family RBPs
Other
Candida albicans
RBPs
68 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0G10956g
Zygosaccharomyces rouxii
ZYRO0G10956g
N
0.778
CAGL0A00935g
Candida glabrata
CAGL0A00935g
N
0.852
A7TKV6_VANPO
Vanderwaltozyma polyspora
A7TKV6_VANPO
N
0.741
16613_YLR323C
Saccharomyces bayanus
16613_YLR323C
N
0.815
15643_YLR323C
Saccharomyces paradoxus
15643_YLR323C
N
0.852
15153_YLR323C
Saccharomyces mikatae
15153_YLR323C
N
0.852
Skud_Contig756.2
Saccharomyces kudriavzevii
Skud_Contig756.2
N
0.815
Medtr8g068390
Medicago truncatula
Medtr8g068390
N
0.741
EFA78387.1
Polysphondylium pallidum
EFA78387.1
N
0.704
s_444298
Phytophthora sojae
s_444298
N
0.704
gww2.6.423.1
Phanerochaete chrysosporium
gww2.6.423.1
N
0.741
gw1.9.174.1
Postia placenta
gw1.9.174.1
N
0.778
gw1.63.49.1
Postia placenta
gw1.63.49.1
N
0.778
gw1.2.524.1
Monosiga brevicollis
gw1.2.524.1
N
0.704
gw1.1.1618.1
Thielavia terrestris
gw1.1.1618.1
N
0.704
gm1.100391
Emiliania huxleyi
gm1.100391
N
0.704
Cd36_15260
Candida dubliniensis
Cd36_15260
N
0.963
CWC24
Ashbya gossypii
CWC24
N
0.741
YALI0C22484g
Yarrowia lipolytica
YALI0C22484g
N
0.704
XP_002490540.1
Pichia pastoris
XP_002490540.1
N
0.852
TP01_0812
Theileria parva
TP01_0812
N
0.704
TA05795
Theileria annulata
TA05795
N
0.704
SAKL0H22880g
Lachancea kluyveri
SAKL0H22880g
N
0.778
Pc22g15470
Penicillium chrysogenum
Pc22g15470
N
0.704
Kwal_17638
Kluyveromyces waltii
Kwal_17638
N
0.778
KLTH0E08580g
Kluyveromyces thermotolerans
KLTH0E08580g
N
0.741
KLLA0C18260g
Kluyveromyces lactis
KLLA0C18260g
N
0.778
GSTUMT00004845001
Tuber melanosporum
GSTUMT00004845001
N
0.704
estExt_fgenesh2_pg.C_50080
Agaricus bisporus
estExt_fgenesh2_pg.C_50080
N
0.741
estExt_fgenesh2_pg.C_30366
Heterobasidion annosum
estExt_fgenesh2_pg.C_30366
N
0.704
estExt_fgenesh2_kg.C_62064
Serpula lacrymans
estExt_fgenesh2_kg.C_62064
N
0.741
e_gw1.5.501.1
Pleurotus ostreatus
e_gw1.5.501.1
N
0.741
EDO07311.1
Babesia bovis
EDO07311.1
N
0.704
fgenesh2_pg.C_scaffold_6000249
Selaginella moellendorfii
fgenesh2_pg.C_scaffold_6000249
N
0.704
estExt_gwp_1W.C_30096
Chlamydomonas reinhardtii
estExt_gwp_1W.C_30096
N
0.704
AT1G01350
Arabidopsis thaliana
AT1G01350-TAIR-G
N
0.704
UM05163
Ustilago maydis
UM05163
N
0.741
SPOG_02814
Schizosaccharomyces cryophilus
SPOG_02814
N
0.741
SOCG_00229
Schizosaccharomyces octosporus
SOCG_00229
N
0.741
SJAG_03112
Schizosaccharomyces japonicus
SJAG_03112
N
0.778
PTSG_02658
Salpingoeca rosetta
PTSG_02658
N
0.704
PITG_04905
Phytophthora infestans
PITG_04905
N
0.704
PGUG_02083
Candida guilliermondii
PGUG_02083
N
0.889
LELG_01192
Lodderomyces elongisporus
LELG_01192
N
0.926
DEHA0A07084g
Debaryomyces hansenii
DEHA0A07084g
N
0.889
CTRG_01084
Candida tropicalis
CTRG_01084
N
0.926
CPSG_00950
Coccidioides posadasii
CPSG_00950
N
0.741
CPAG_04594
Candida parapsilosis
CPAG_04594
N
0.926
CLUG_01324
Candida lusitaniae
CLUG_01324
N
0.926
CIMG_06140
Coccidioides immitis
CIMG_06140
N
0.741
AT5G06420
Arabidopsis thaliana
AT5G06420-TAIR-G
N
0.704
ACLA_012790
Aspergillus clavatus
CADACLAG00001301
N
0.704
estExt_GeneWisePlus_human.C_50103
Laccaria bicolor
estExt_GeneWisePlus_human.C_50103
N
0.741
estExt_Genewise1Plus.C_80076
Volvox carteri
estExt_Genewise1Plus.C_80076
N
0.704
estExt_Genewise1.C_340021
Melampsora laricis populina
estExt_Genewise1.C_340021
N
0.704
estExt_fgenesh1_pm.C_chr_30248
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_30248
N
0.704
e_gww1.2.1.1323.1
Pichia stipitis
e_gww1.2.1.1323.1
N
0.889
e_gw1.8.388.1
Schizophyllum commune
e_gw1.8.388.1
N
0.704
e_gw1.2.1336.1
Trichoplax adhaerens
e_gw1.2.1336.1
N
0.704
CMU_031370
Cryptosporidium muris
CMU_031370
N
0.741
Chro.60383
Cryptosporidium hominis
Chro.60383
N
0.704
cgd6_3300
Cryptosporidium parvum
cgd6_3300
N
0.704
CWC24
Saccharomyces cerevisiae
YLR323C
N
0.815
cwf24
Schizosaccharomyces pombe
SPBC13E7.02
N
0.778
XM_002892025.1
Arabidopsis lyrata
scaffold_100114.1
N
0.704
GJ23438
Drosophila virilis
FBgn0210538
N
0.704
AFUA_5G07720
Aspergillus fumigatus
CADAFUAG00006406
N
0.704
CC1G_03236
Coprinopsis cinerea
CC1G_03236
N
0.704