CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TERG_02605
(
Trichophyton rubrum
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
TERG_02605
T01659_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TERG_02605T0
CCCH ZF
1
24
MAICTYYQQGRCKFGDRCAYEHPK
Links
Other
CCCH ZF
family RBPs
Other
Trichophyton rubrum
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MCYG_08333
Microsporum canis
MCYG_08333
N
0.833
MGYG_05741
Microsporum gypseum
MGYG_05741
N
1.000
TEQG_01674
Trichophyton equinum
TEQG_01674
N
1.000
TESG_01971
Trichophyton tonsurans
TESG_01971
N
1.000
CMG145C
Cyanidioschyzon merolae
CMG145C
N
0.708
ANIA_04595
Aspergillus nidulans
CADANIAG00005841
N
0.750