CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NUPL2
(
Erinaceus europaeus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSEEUG00000006736
T02557_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000006135
CCCH ZF
1
18
MTICQFFLQGRCRFGDRC
Links
Other
CCCH ZF
family RBPs
Other
Erinaceus europaeus
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CBN15812
Caenorhabditis brenneri
CBN15812
N
0.000
CBN23793
Caenorhabditis brenneri
CBN23793
N
0.000
CRE11038
Caenorhabditis remanei
CRE11038
N
0.000
CRE23244
Caenorhabditis remanei
CRE23244
N
0.000
T11G6.8
Caenorhabditis elegans
T11G6.8
N
0.000