CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DUS3L
(
Echinops telfairi
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSETEG00000004749
T02580_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000003878
CCCH ZF
113
139
DGNRLCPSVVQVRVCFYGDRCRFLHDL
ENSETEP00000003878
CCCH ZF
154
172
CVLFDTFGRCPYGVTCRFA
Links
Other
CCCH ZF
family RBPs
Other
Echinops telfairi
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DUS3L
Bos taurus
ENSBTAG00000011842
N
0.760
DUS3L
Pteropus vampyrus
ENSPVAG00000010503
N
0.750
DUS3L
Pan troglodytes
ENSPTRG00000010343
N
0.725
ENSPPYG00000009435
Pongo pygmaeus
ENSPPYG00000009435
N
0.725
DUS3L
Ochotona princeps
ENSOPRG00000000954
N
0.706
DUS3L
Loxodonta africana
ENSLAFG00000027552
N
0.725
DUS3L
Gorilla gorilla
ENSGGOG00000027433
N
0.706
DUS3L
Homo sapiens
ENSG00000141994
N
0.725
DUS3L
Callithrix jacchus
ENSCJAG00000016997
N
0.706
Ame_R016396
Ailuropoda melanoleuca
Ame_R016396
N
0.725