CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DUS3L
(
Bos taurus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSBTAG00000011842
T02260_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000015715
CCCH ZF
119
147
DKNKLCPSLVQESAARCFYGDRCRFLHDV
ENSBTAP00000015715
CCCH ZF
160
180
PSCVLFETFGRCPYGVTCRFA
Links
Other
CCCH ZF
family RBPs
Other
Bos taurus
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000009435
Pongo pygmaeus
ENSPPYG00000009435
N
0.882
Ame_R016396
Ailuropoda melanoleuca
Ame_R016396
N
0.882
DUS3L
Pan troglodytes
ENSPTRG00000010343
N
0.882
DUS3L
Homo sapiens
ENSG00000141994
N
0.882
DUS3L
Pteropus vampyrus
ENSPVAG00000010503
N
0.880
DUS3L
Gorilla gorilla
ENSGGOG00000027433
N
0.863
DUS3L
Callithrix jacchus
ENSCJAG00000016997
N
0.863
DUS3L
Loxodonta africana
ENSLAFG00000027552
N
0.804
DUS3L
Cavia porcellus
ENSCPOG00000021236
N
0.804
DUS3L
Monodelphis domestica
ENSMODG00000001339
N
0.780
DUS3L
Echinops telfairi
ENSETEG00000004749
N
0.760
DUS3L
Canis familiaris
ENSCAFG00000018762
N
0.725
Dus3l
Mus musculus
ENSMUSG00000007603
N
0.725
DUS3L
Meleagris gallopavo
ENSMGAG00000001547
N
0.720
DUS3L
Ochotona princeps
ENSOPRG00000000954
N
0.706
DUS3L
Gallus gallus
ENSGALG00000001800
N
0.700