CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UNKL
(
Felis catus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSFCAG00000010643
T02619_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000009881
CCCH ZF
106
117
RYYKTGTCIHET
ENSFCAP00000009881
CCCH ZF
119
136
ARGHCVKNGLHCAFAHGP
ENSFCAP00000009881
CCCH ZF
370
396
YKSTKCNDMRQTGYCPRGPFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Felis catus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSDORG00000015663
Dipodomys ordii
ENSDORG00000015663
N
0.965
UNKL
Myotis lucifugus
ENSMLUG00000011207
N
0.982
UNKL
Procavia capensis
ENSPCAG00000017060
N
0.965
UNKL
Pteropus vampyrus
ENSPVAG00000016649
N
1.000