CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DUS3L
(
Otolemur garnettii
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSOGAG00000016549
T03096_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000014811
CCCH ZF
125
143
QVSITTCFFGDRCRFLHDV
ENSOGAP00000014811
CCCH ZF
155
176
GPRCVLFETFGRCPYGVTCRFA
Links
Other
CCCH ZF
family RBPs
Other
Otolemur garnettii
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DUS3L
Canis familiaris
ENSCAFG00000018762
N
0.881
DUS3L
Callithrix jacchus
ENSCJAG00000016997
N
0.706
DUS3L
Cavia porcellus
ENSCPOG00000021236
N
0.771
LOC100147314
Equus caballus
ENSECAG00000019359
N
0.805
DUS3L
Homo sapiens
ENSG00000141994
N
0.725
DUS3L
Gorilla gorilla
ENSGGOG00000027433
N
0.706
ENSPPYG00000009435
Pongo pygmaeus
ENSPPYG00000009435
N
0.725
DUS3L
Pan troglodytes
ENSPTRG00000010343
N
0.725
Ame_R016396
Ailuropoda melanoleuca
Ame_R016396
N
0.706