CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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unk
(
Drosophila melanogaster
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
FBgn0004395
T03665_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0083794
CCCH ZF
77
99
CTKYDETTGICPEGDECPYLHRT
FBpp0083794
CCCH ZF
124
140
RGYCVKNGLHCAFAHGM
FBpp0083794
CCCH ZF
244
263
EWGEPGNCEAGDNCQYCHTR
FBpp0083794
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
FBpp0083795
CCCH ZF
77
99
CTKYDETTGICPEGDECPYLHRT
FBpp0083795
CCCH ZF
124
140
RGYCVKNGLHCAFAHGM
FBpp0083795
CCCH ZF
244
263
EWGEPGNCEAGDNCQYCHTR
FBpp0083795
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
FBpp0294022
CCCH ZF
77
99
CTKYDETTGICPEGDECPYLHRT
FBpp0294022
CCCH ZF
124
140
RGYCVKNGLHCAFAHGM
FBpp0294022
CCCH ZF
244
263
EWGEPGNCEAGDNCQYCHTR
FBpp0294022
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
FBpp0294023
CCCH ZF
77
99
CTKYDETTGICPEGDECPYLHRT
FBpp0294023
CCCH ZF
124
140
RGYCVKNGLHCAFAHGM
FBpp0294023
CCCH ZF
244
263
EWGEPGNCEAGDNCQYCHTR
FBpp0294023
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
FBpp0294024
CCCH ZF
77
99
CTKYDETTGICPEGDECPYLHRT
FBpp0294024
CCCH ZF
124
140
RGYCVKNGLHCAFAHGM
FBpp0294024
CCCH ZF
244
263
EWGEPGNCEAGDNCQYCHTR
FBpp0294024
CCCH ZF
273
299
YKSTKCNDVQQAGYCPRSVFCAFAHVE
Links
Other
CCCH ZF
family RBPs
Other
Drosophila melanogaster
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Aqu1.200420
Amphimedon queenslandica
Aqu1.200420
N
0.000
Aqu1.220316
Amphimedon queenslandica
Aqu1.220316
N
0.000
Aqu1.217817
Amphimedon queenslandica
Aqu1.217817
N
0.000
Aqu1.217241
Amphimedon queenslandica
Aqu1.217241
N
0.000
Aqu1.215609
Amphimedon queenslandica
Aqu1.215609
N
0.000
Aqu1.211516
Amphimedon queenslandica
Aqu1.211516
N
0.000
Aqu1.210879
Amphimedon queenslandica
Aqu1.210879
N
0.000
Aqu1.208732
Amphimedon queenslandica
Aqu1.208732
N
0.000
Aqu1.206537
Amphimedon queenslandica
Aqu1.206537
N
0.000
Aqu1.203950
Amphimedon queenslandica
Aqu1.203950
N
0.000
Aqu1.203391
Amphimedon queenslandica
Aqu1.203391
N
0.000
Aqu1.201766
Amphimedon queenslandica
Aqu1.201766
N
0.000
Aqu1.201624
Amphimedon queenslandica
Aqu1.201624
N
0.000
Aqu1.201536
Amphimedon queenslandica
Aqu1.201536
N
0.000
Aqu1.201112
Amphimedon queenslandica
Aqu1.201112
N
0.000
Aqu1.200997
Amphimedon queenslandica
Aqu1.200997
N
0.000
Aqu1.220789
Amphimedon queenslandica
Aqu1.220789
N
0.000