Aqu1.220789 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.220789 T13301_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.220789 CCHC ZF 315 332

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Aqu1.208732 Amphimedon queenslandica Aqu1.208732 N 0.944
Aqu1.206537 Amphimedon queenslandica Aqu1.206537 N 0.944
Aqu1.210879 Amphimedon queenslandica Aqu1.210879 N 0.944
Aqu1.215609 Amphimedon queenslandica Aqu1.215609 N 0.944
Aqu1.220316 Amphimedon queenslandica Aqu1.220316 N 0.944
Aqu1.217241 Amphimedon queenslandica Aqu1.217241 N 0.944
Aqu1.201766 Amphimedon queenslandica Aqu1.201766 N 0.944
Aqu1.203391 Amphimedon queenslandica Aqu1.203391 N 0.944
Aqu1.200997 Amphimedon queenslandica Aqu1.200997 N 0.944
Aqu1.201536 Amphimedon queenslandica Aqu1.201536 N 0.944
Aqu1.201112 Amphimedon queenslandica Aqu1.201112 N 0.944
Aqu1.201624 Amphimedon queenslandica Aqu1.201624 N 0.889
Aqu1.217817 Amphimedon queenslandica Aqu1.217817 N 0.889
Aqu1.200420 Amphimedon queenslandica Aqu1.200420 N 0.833
Aqu1.211516 Amphimedon queenslandica Aqu1.211516 N 0.778
Aqu1.203950 Amphimedon queenslandica Aqu1.203950 N 0.778
Aqu1.201670 Amphimedon queenslandica Aqu1.201670 N 0.778
Aqu1.200683 Amphimedon queenslandica Aqu1.200683 N 0.722
Minc19150 Meloidogyne incognita Minc19150 N 0.722