mgf007299m (Mimulus guttatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 mgf007299m T05620_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf007299m CCCH ZF 18 44
mgf007299m CCCH ZF 63 89
mgf007299m CCCH ZF 113 135
mgf007299m CCCH ZF 259 285
mgf007299m CCCH ZF 305 331

Links

Other CCCH ZF family RBPs
Other Mimulus guttatus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm10370 Apis mellifera amel4_ncbi_hmm10370 N 0.000
PHUM378950 Pediculus humanus PHUM378950 N 0.000
GA29081-RA Drosophila pseudoobscura FBgn0250439 N 0.000
GE10978 Drosophila yakuba FBgn0228807 N 0.000
GK23713 Drosophila willistoni FBgn0225675 N 0.000
GJ13092 Drosophila virilis FBgn0200320 N 0.000
GD17712 Drosophila simulans FBgn0189261 N 0.000
GL21138 Drosophila persimilis FBgn0158732 N 0.000
GI11727 Drosophila mojavensis FBgn0134486 N 0.000
GH13625 Drosophila grimshawi FBgn0121101 N 0.000
GG21408 Drosophila erecta FBgn0113587 N 0.000
GG11065 Drosophila erecta FBgn0103367 N 0.000
GF15900 Drosophila ananassae FBgn0092923 N 0.000
Spf45 Drosophila melanogaster FBgn0086683 N 0.000
AGAP009296 Anopheles gambiae AGAP009296 N 0.000
nasonia_NCBI_hmm86703 Nasonia vitripennis nasonia_NCBI_hmm86703 N 0.000
DGIL_AUG5s6659g2t1 Acyrtosiphon pisum DGIL_AUG5s6659g2t1 N 0.000
DGIL_AUG5s4404g2t1 Acyrtosiphon pisum DGIL_AUG5s4404g2t1 N 0.000
BGIBMGA003462 Bombyx mori BGIBMGA003462 N 0.000