CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_05176
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_05176
T08380_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_05176T0
CCHC ZF
232
249
RKCYNCSKMGHTSPNCPQ
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_02503
Puccinia graminis
PGTG_02503
N
0.722
PGTG_10340
Puccinia graminis
PGTG_10340
N
0.722
PGTG_17297
Puccinia graminis
PGTG_17297
N
0.722
PTTG_00921
Puccinia triticina
PTTG_00921
N
0.722
PTTG_10560
Puccinia triticina
PTTG_10560
N
0.889
PTTG_10566
Puccinia triticina
PTTG_10566
N
0.889
PTTG_10569
Puccinia triticina
PTTG_10569
N
0.889