CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_00921
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_00921
T08326_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_00921T0
CCHC ZF
303
320
VKCYNCQKLGHTSRNCPK
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_17297
Puccinia graminis
PGTG_17297
N
0.833
Aqu1.201090
Amphimedon queenslandica
Aqu1.201090
N
0.778
CC1G_00600
Coprinopsis cinerea
CC1G_00600
N
0.722
PGTG_10340
Puccinia graminis
PGTG_10340
N
0.722
PGTG_02503
Puccinia graminis
PGTG_02503
N
0.722
PTTG_10569
Puccinia triticina
PTTG_10569
N
0.722
PTTG_05176
Puccinia triticina
PTTG_05176
N
0.722
PTTG_09337
Puccinia triticina
PTTG_09337
N
0.722
PTTG_10560
Puccinia triticina
PTTG_10560
N
0.722
PTTG_10566
Puccinia triticina
PTTG_10566
N
0.722
PTTG_02510
Puccinia triticina
PTTG_02510
N
0.722