UM04587 (Ustilago maydis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 UM04587 T08741_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
UM04587 CCHC ZF 608 625

Links

Other CCHC ZF family RBPs
Other Ustilago maydis RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT5G51280 Arabidopsis thaliana AT5G51280-TAIR-G N 0.722
chr2.LjT16G06.70.nd Lotus japonicus chr2.LjT16G06.70.nd N 0.722
Medtr1g122060 Medicago truncatula Medtr1g122060 N 0.722
Medtr1g121690 Medicago truncatula Medtr1g121690 N 0.722
mgf002732m Mimulus guttatus mgf002732m N 0.722
Glyma03g39670.1 Glycine max Glyma03g39670.1 N 0.722
estExt_Genewise1.C_10991 Sporobolomyces roseus estExt_Genewise1.C_10991 N 0.722
Cucsa.105640 Cucumis sativus Cucsa.105640 N 0.722
cassava23082.valid.m1 Manihot esculenta cassava23082.valid.m1 N 0.722
cassava23081.valid.m1 Manihot esculenta cassava23081.valid.m1 N 0.722
29171.m000268 Ricinus communis 29171.m000268 N 0.722
XM_002864058.1 Arabidopsis lyrata scaffold_801560.1 N 0.722
B9N0D8_POPTR Populus trichocarpa POPTR_0004s23270 N 0.722
GSVIVG00017454001 Vitis vinifera GSVIVG00017454001 N 0.722
XM_002888366.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000621 N 0.722
ppa003295m Prunus persica ppa003295m N 0.722