GSVIVG00009823001 (Vitis vinifera)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 GSVIVG00009823001 T10650_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00009823001 CCHC ZF 49 66
GSVIVT00009823001 CCHC ZF 68 85
GSVIVT00009823001 CCHC ZF 87 104
GSVIVT00009823001 CCHC ZF 106 123
GSVIVT00009823001 CCHC ZF 132 149
GSVIVT00009823001 CCHC ZF 151 168
GSVIVT00009823001 CCHC ZF 170 187
GSVIVT00009823001 CCHC ZF 206 222
GSVIVT00009823001 CCHC ZF 226 243

Links

Other CCHC ZF family RBPs
Other Vitis vinifera RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBM12B Bos taurus ENSBTAG00000013408 N 0.000
C430048L16Rik Mus musculus ENSMUSG00000052137 N 0.000
RBM12B Ornithorhynchus anatinus ENSOANG00000015735 N 0.000
RBM12B Oryctolagus cuniculus ENSOCUG00000010353 N 0.000
RBM12B Pan troglodytes ENSPTRG00000020420 N 0.000
RBM12B Pteropus vampyrus ENSPVAG00000011803 N 0.000
Rbm12b Rattus norvegicus ENSRNOG00000016330 N 0.000
RBM12B Sus scrofa ENSSSCG00000006110 N 0.000
RBM12B Tarsius syrichta ENSTSYG00000012515 N 0.000
Rbm12b Mus musculus ENSMUSG00000046667 N 0.000
RBM12B Monodelphis domestica ENSMODG00000007436 N 0.000
RBM12B Canis familiaris ENSCAFG00000009109 N 0.000
RBM12B Choloepus hoffmanni ENSCHOG00000008934 N 0.000
RBM12B Callithrix jacchus ENSCJAG00000000124 N 0.000
RBM12B Cavia porcellus ENSCPOG00000007815 N 0.000
RBM12B Equus caballus ENSECAG00000017870 N 0.000
RBM12B Homo sapiens ENSG00000183808 N 0.000
RBM12B Gorilla gorilla ENSGGOG00000011909 N 0.000
RBM12B Loxodonta africana ENSLAFG00000029949 N 0.000
Ame_R004467 Ailuropoda melanoleuca Ame_R004467 N 0.000