LOC_Os02g25170 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os02g25170 T10915_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g25170.1 CCHC ZF 252 269

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os12g26310 Oryza sativa LOC_Os12g26310 N 0.889
LOC_Os08g31150 Oryza sativa LOC_Os08g31150 N 1.000
LOC_Os08g19540 Oryza sativa LOC_Os08g19540 N 0.944
LOC_Os08g14290 Oryza sativa LOC_Os08g14290 N 0.722
LOC_Os07g37900 Oryza sativa LOC_Os07g37900 N 1.000
LOC_Os07g33150 Oryza sativa LOC_Os07g33150 N 1.000
LOC_Os07g28370 Oryza sativa LOC_Os07g28370 N 1.000
LOC_Os07g15470 Oryza sativa LOC_Os07g15470 N 0.944
LOC_Os06g32470 Oryza sativa LOC_Os06g32470 N 1.000
LOC_Os09g02960 Oryza sativa LOC_Os09g02960 N 0.833
LOC_Os09g04240 Oryza sativa LOC_Os09g04240 N 1.000
LOC_Os09g07400 Oryza sativa LOC_Os09g07400 N 0.944
LOC_Os12g24610 Oryza sativa LOC_Os12g24610 N 1.000
LOC_Os12g13330 Oryza sativa LOC_Os12g13330 N 0.833
LOC_Os11g20610 Oryza sativa LOC_Os11g20610 N 0.722
LOC_Os11g19610 Oryza sativa LOC_Os11g19610 N 1.000
LOC_Os11g09919 Oryza sativa LOC_Os11g09919 N 1.000
LOC_Os11g02880 Oryza sativa LOC_Os11g02880 N 1.000
LOC_Os10g21510 Oryza sativa LOC_Os10g21510 N 0.944
LOC_Os09g14470 Oryza sativa LOC_Os09g14470 N 1.000
LOC_Os06g28490 Oryza sativa LOC_Os06g28490 N 0.944
LOC_Os06g25850 Oryza sativa LOC_Os06g25850 N 0.889
LOC_Os06g25710 Oryza sativa LOC_Os06g25710 N 0.778
LOC_Os03g33828 Oryza sativa LOC_Os03g33828 N 0.944
LOC_Os03g31530 Oryza sativa LOC_Os03g31530 N 1.000
LOC_Os03g29520 Oryza sativa LOC_Os03g29520 N 1.000
LOC_Os03g16530 Oryza sativa LOC_Os03g16530 N 1.000
LOC_Os03g15140 Oryza sativa LOC_Os03g15140 N 1.000
LOC_Os02g36470 Oryza sativa LOC_Os02g36470 N 0.944
LOC_Os02g24520 Oryza sativa LOC_Os02g24520 N 0.944
LOC_Os01g51340 Oryza sativa LOC_Os01g51340 N 1.000
LOC_Os03g37210 Oryza sativa LOC_Os03g37210 N 1.000
LOC_Os04g30440 Oryza sativa LOC_Os04g30440 N 0.944
LOC_Os04g48590 Oryza sativa LOC_Os04g48590 N 1.000
LOC_Os06g25560 Oryza sativa LOC_Os06g25560 N 1.000
LOC_Os06g22750 Oryza sativa LOC_Os06g22750 N 1.000
LOC_Os06g17350 Oryza sativa LOC_Os06g17350 N 1.000
LOC_Os05g26000 Oryza sativa LOC_Os05g26000 N 0.944
LOC_Os05g24310 Oryza sativa LOC_Os05g24310 N 0.722
LOC_Os05g24100 Oryza sativa LOC_Os05g24100 N 1.000
LOC_Os05g20450 Oryza sativa LOC_Os05g20450 N 1.000
LOC_Os05g19460 Oryza sativa LOC_Os05g19460 N 1.000
LOC_Os01g24860 Oryza sativa LOC_Os01g24860 N 0.944