LOC_Os04g06960 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os04g06960 T11150_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os04g06960.1 CCHC ZF 93 110

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g52000 Oryza sativa LOC_Os01g52000 N 0.889
LOC_Os10g26030 Oryza sativa LOC_Os10g26030 N 1.000
LOC_Os09g08340 Oryza sativa LOC_Os09g08340 N 0.889
LOC_Os08g03180 Oryza sativa LOC_Os08g03180 N 0.944
LOC_Os07g05430 Oryza sativa LOC_Os07g05430 N 0.889
LOC_Os03g56530 Oryza sativa LOC_Os03g56530 N 0.889
LOC_Os03g47410 Oryza sativa LOC_Os03g47410 N 1.000
LOC_Os03g28110 Oryza sativa LOC_Os03g28110 N 0.944
LOC_Os03g05850 Oryza sativa LOC_Os03g05850 N 0.889
LOC_Os02g05260 Oryza sativa LOC_Os02g05260 N 1.000
LOC_Os12g01090 Oryza sativa LOC_Os12g01090 N 0.722