LOC_Os03g56530 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os03g56530 T11094_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g56530.1 CCHC ZF 263 280

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g05850 Oryza sativa LOC_Os03g05850 N 1.000
LOC_Os01g52000 Oryza sativa LOC_Os01g52000 N 1.000
LOC_Os07g05430 Oryza sativa LOC_Os07g05430 N 1.000
LOC_Os09g08340 Oryza sativa LOC_Os09g08340 N 1.000
LOC_Os04g06960 Oryza sativa LOC_Os04g06960 N 0.889
LOC_Os02g05260 Oryza sativa LOC_Os02g05260 N 0.889
LOC_Os10g26030 Oryza sativa LOC_Os10g26030 N 0.889
LOC_Os03g47410 Oryza sativa LOC_Os03g47410 N 0.889
LOC_Os03g28110 Oryza sativa LOC_Os03g28110 N 0.833
LOC_Os08g03180 Oryza sativa LOC_Os08g03180 N 0.833
LOC_Os12g18320 Oryza sativa LOC_Os12g18320 N 0.778
LOC_Os12g43179 Oryza sativa LOC_Os12g43179 N 0.722
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.722
LOC_Os02g34030 Oryza sativa LOC_Os02g34030 N 0.722
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.722
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.722
LOC_Os11g23244 Oryza sativa LOC_Os11g23244 N 0.722
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.722
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.722
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.722
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.722
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.722
LOC_Os10g24640 Oryza sativa LOC_Os10g24640 N 0.722
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.722
LOC_Os11g21830 Oryza sativa LOC_Os11g21830 N 0.722
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.722
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.722