LOC_Os06g51540 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g51540 T11720_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g51540.1 CCHC ZF 190 207

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
13113.t00006 Oryza sativa 13113.t00006 N 0.833
LOC_Os09g05120 Oryza sativa LOC_Os09g05120 N 0.833
LOC_Os09g06290 Oryza sativa LOC_Os09g06290 N 0.833
LOC_Os09g06410 Oryza sativa LOC_Os09g06410 N 0.889
LOC_Os09g26090 Oryza sativa LOC_Os09g26090 N 0.833
LOC_Os10g17724 Oryza sativa LOC_Os10g17724 N 0.833
LOC_Os11g09950 Oryza sativa LOC_Os11g09950 N 0.778
LOC_Os11g11800 Oryza sativa LOC_Os11g11800 N 0.833
LOC_Os11g15140 Oryza sativa LOC_Os11g15140 N 0.722
LOC_Os11g26000 Oryza sativa LOC_Os11g26000 N 0.833
LOC_Os12g08410 Oryza sativa LOC_Os12g08410 N 0.778
LOC_Os12g24920 Oryza sativa LOC_Os12g24920 N 0.833
LOC_Os12g30850 Oryza sativa LOC_Os12g30850 N 0.778
LOC_Os12g33520 Oryza sativa LOC_Os12g33520 N 0.833
LOC_Os08g30400 Oryza sativa LOC_Os08g30400 N 0.778
LOC_Os07g15070 Oryza sativa LOC_Os07g15070 N 0.833
LOC_Os02g17800 Oryza sativa LOC_Os02g17800 N 0.833
LOC_Os02g22180 Oryza sativa LOC_Os02g22180 N 0.778
LOC_Os02g24230 Oryza sativa LOC_Os02g24230 N 0.833
LOC_Os02g25670 Oryza sativa LOC_Os02g25670 N 0.778
LOC_Os04g07550 Oryza sativa LOC_Os04g07550 N 0.833
LOC_Os04g13790 Oryza sativa LOC_Os04g13790 N 0.889
LOC_Os04g16890 Oryza sativa LOC_Os04g16890 N 0.833
LOC_Os04g18470 Oryza sativa LOC_Os04g18470 N 0.778
LOC_Os04g23950 Oryza sativa LOC_Os04g23950 N 0.778
LOC_Os05g24420 Oryza sativa LOC_Os05g24420 N 0.722
LOC_Os05g28250 Oryza sativa LOC_Os05g28250 N 0.778
LOC_Os06g28850 Oryza sativa LOC_Os06g28850 N 0.889
LOC_Os06g34310 Oryza sativa LOC_Os06g34310 N 0.833
LOC_Os12g33640 Oryza sativa LOC_Os12g33640 N 0.833