LOC_Os02g22180 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os02g22180 T10902_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g22180.1 CCHC ZF 39 56

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os07g15070 Oryza sativa LOC_Os07g15070 N 0.889
LOC_Os08g30400 Oryza sativa LOC_Os08g30400 N 0.889
LOC_Os09g26090 Oryza sativa LOC_Os09g26090 N 0.889
LOC_Os12g33520 Oryza sativa LOC_Os12g33520 N 0.889
LOC_Os05g24420 Oryza sativa LOC_Os05g24420 N 0.889
LOC_Os04g13790 Oryza sativa LOC_Os04g13790 N 0.889
LOC_Os04g07550 Oryza sativa LOC_Os04g07550 N 0.889
LOC_Os10g17724 Oryza sativa LOC_Os10g17724 N 0.833
LOC_Os02g17800 Oryza sativa LOC_Os02g17800 N 0.833
LOC_Os11g09950 Oryza sativa LOC_Os11g09950 N 0.833
LOC_Os11g11800 Oryza sativa LOC_Os11g11800 N 0.833
LOC_Os12g24920 Oryza sativa LOC_Os12g24920 N 0.833
LOC_Os09g06410 Oryza sativa LOC_Os09g06410 N 0.833
LOC_Os12g08410 Oryza sativa LOC_Os12g08410 N 0.833
LOC_Os11g15140 Oryza sativa LOC_Os11g15140 N 0.833
LOC_Os12g30850 Oryza sativa LOC_Os12g30850 N 0.833
LOC_Os09g05120 Oryza sativa LOC_Os09g05120 N 0.833
LOC_Os09g06290 Oryza sativa LOC_Os09g06290 N 0.833
LOC_Os04g23950 Oryza sativa LOC_Os04g23950 N 0.833
LOC_Os04g16890 Oryza sativa LOC_Os04g16890 N 0.833
LOC_Os06g28850 Oryza sativa LOC_Os06g28850 N 0.833
LOC_Os02g24230 Oryza sativa LOC_Os02g24230 N 0.833
LOC_Os06g34310 Oryza sativa LOC_Os06g34310 N 0.833
LOC_Os12g33640 Oryza sativa LOC_Os12g33640 N 0.778
LOC_Os02g25670 Oryza sativa LOC_Os02g25670 N 0.778
13113.t00006 Oryza sativa 13113.t00006 N 0.778
LOC_Os05g28250 Oryza sativa LOC_Os05g28250 N 0.778
LOC_Os06g51540 Oryza sativa LOC_Os06g51540 N 0.778
LOC_Os11g26000 Oryza sativa LOC_Os11g26000 N 0.778
LOC_Os04g18470 Oryza sativa LOC_Os04g18470 N 0.778